PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS67081.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 96aa    MW: 10660.9 Da    PI: 8.5329
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS67081.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.91.6e-0719641454
                HHHHHHHHHHHCTSCCC........TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPkas.....kapskKlsKaeiLekAveYIksL 54
                d+i +  ++L++l+P++      + ps K+  + +L+ +++YI+sL
  EPS67081.1 19 DQIADLVSRLQQLVPESHrggrrSSPSDKVPASKVLQDTCNYIRSL 64
                6899999*********777*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.5E-8380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.87564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.59E-8781IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.9E-51964IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    Send to blast
MSSRRIRSRA STVTRISDDQ IADLVSRLQQ LVPESHRGGR RSSPSDKVPA SKVLQDTCNY  60
IRSLHQEVGN LSDQLSELLE TSNVDSDQAA IIRSLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006344270.16e-32PREDICTED: transcription factor PRE6-like
SwissprotQ9LJX19e-32PRE5_ARATH; Transcription factor PRE5
TrEMBLS8CQC84e-62S8CQC8_9LAMI; Uncharacterized protein (Fragment)
STRINGPGSC0003DMT4000074302e-31(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35324161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.15e-33bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]